Computing Reviews
Today's Issue Hot Topics Search Browse Recommended My Account Log In
Review Help
Search
State-of-the-art eigensolvers for electronic structure calculations of large scale nano-systems
Vömel C., Tomov S., Marques O., Canning A., Wang L., Dongarra J. Journal of Computational Physics227 (15):7113-7124,2008.Type:Article
Date Reviewed: Sep 9 2008

The use of electronic structure calculations in understanding nano-systems is a natural area for high-quality computational modeling and simulation. This paper provides a fundamental study of how to select appropriate numerical methods for use in such applications. Vömel et al. consider current state-of-the-art eigensolvers that are used in electronic structure calculations and apply them to several test problems selected for modeling nano-systems.

The paper begins with a brief introduction to Kohn-Sham theory and self-consistent field iteration for the ground state. For nano-systems, the optical and electronic properties can be determined from interior eigenstates. The paper uses matrix-free computation, and considers valence band maximum (VBM) states that are highest-occupied states and conduction band minimum (CBM) states that are lowest-unoccupied states.

The paper provides an introduction to iterative Hermitian eigensolvers and considers five methods: preconditioned conjugate gradients (PCG), locally optimal block preconditioned conjugate gradients (LOBPCG), implicit restart Arnoldi/Lanczos (IRL), generalized Davidson + k (GD+k) (where k is the number of vectors used from the previous iteration), and the Jacobi-Davidson with quasi-minimal residual (QMR) method (JDQMR) as an inner solver.

These methods are explained in detail, and three test configurations for quantum dots and wires are described in Section 4. Detailed results and interpretation are given in Section 5, and a summary is provided in Section 6. These results lead to the recommendation of the PCG and the GD+k methods. However, GD+k is found to be two to three times faster than PCG. Additionally, the paper concludes with the encouraging comment that the authors have developed a bulk-based preconditioner for PCG for use in band edge calculations, and propose applying it to GD+k in future work. It will be interesting to see these results in the future.

Reviewer:  Mike Minkoff Review #: CR136040 (0907-0675)
Bookmark and Share
  Reviewer Selected
 
 
Eigenvalues And Eigenvectors (Direct And Iterative Methods) (G.1.3 ... )
 
 
Chemistry (J.2 ... )
 
 
Physics (J.2 ... )
 
 
Mathematical Software (G.4 )
 
Would you recommend this review?
yes
no
Other reviews under "Eigenvalues And Eigenvectors (Direct And Iterative Methods)": Date
On two more Eigenvalue methods for an alternating sequential parallel system
Wallach Y. Computing 32(1): 33-41, 1984. Type: Article
Feb 1 1985
Bounds for the Positive Eigenvectors of Nonnegative Matrices and for their Approximations by Decomposition
Courtois P., Semal P. Journal of the ACM 31(4): 804-825, 1984. Type: Article
Jun 1 1985
Solution of large, dense symmetric generalized eigenvalue problems using secondary storage
Grimes R., Simon H. (ed) ACM Transactions on Mathematical Software 14(3): 241-256, 1988. Type: Article
Mar 1 1989
more...

E-Mail This Printer-Friendly
Send Your Comments
Contact Us
Reproduction in whole or in part without permission is prohibited.   Copyright 1999-2024 ThinkLoud®
Terms of Use
| Privacy Policy