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Tradigo, Giuseppe
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High-performance data structures for de novo assembly of genomes: cache oblivious generic programming
Milicchio F., Tradigo G., Veltri P., Prosperi M. BCB 2016 (Proceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, Seattle, WA, Oct 2-5, 2016) 657-662, 2016. Type: Proceedings
This short paper presents a C++ library, in a generic programming style, for more efficient de novo genome assembly. The basic idea is to use a cache oblivious data structure....
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Jan 19 2017
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