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Journal of Biomedical Informatics
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Date Reviewed
Natural language processing systems for capturing and standardizing unstructured clinical information
Kreimeyer K., Foster M., Pandey A., Arya N., Halford G., Jones S., Forshee R., Walderhaug M., Botsis T. Journal of Biomedical Informatics 73(C): 14-29, 2017. Type: Article
Clinical information could be the poster child for big data and artificial intelligence (AI). It encompasses large amounts of unstructured text, which has to be harnessed to be effectively used (1) by medical personnel treating a patie...
Jun 11 2018
Semantic concept-enriched dependence model for medical information retrieval
Choi S., Choi J., Yoo S., Kim H., Lee Y. Journal of Biomedical Informatics 4718-27, 2014. Type: Article
The importance of semantics in search techniques is well known. This is especially true in medical terminologies, where semantics have been heavily utilized in developing ontology models for storing and retrieving important information...
Sep 18 2014
Discovery of clinical pathway patterns from event logs using probabilistic topic models
Huang Z., Dong W., Ji L., Gan C., Lu X., Duan H. Journal of Biomedical Informatics 4739-57, 2014. Type: Article
The utilization of a clinical information system (CIS) can help healthcare organizations (HCO) to improve the efficiency of clinical coordinative treatments. Furthermore, the event logs generated by the CIS can conversely support the c...
Sep 4 2014
TURF: toward a unified framework of EHR usability
Zhang J., Walji M. Journal of Biomedical Informatics 44(6): 1056-1067, 2011. Type: Article
Developing electronic health record (EHR) systems can be challenging since software developers are not also expected to be clinicians. In this paper, Zhang and Walji present TURF, a framework for the development of EHR systems....
Mar 21 2012
Leveraging health social networking communities in translational research
Webster Y., Dow E., Koehler J., Gudivada R., Palakal M. Journal of Biomedical Informatics 44(4): 536-544, 2011. Type: Article
An interesting way in which social networks provide value to individuals relates to specific health conditions. Health social networking communities provide connections and support for people with similar medical conditions, including ...
Dec 9 2011
Disambiguation in the biomedical domain: the role of ambiguity type
Stevenson M., Guo Y. Journal of Biomedical Informatics 43(6): 972-981, 2010. Type: Article
It is a widely held assumption that in a domain-specific sublanguage such as the one for biomedicine, ambiguities are few or even nonexistent. Stevenson and Guo provide ample and intriguing proof to the contrary. Word sense ambiguities...
Feb 25 2011
Word sense disambiguation across two domains: biomedical literature and clinical notes
Savova G., Coden A., Sominsky I., Johnson R., Ogren P., Groen P., Chute C. Journal of Biomedical Informatics 41(6): 1088-1100, 2008. Type: Article
This paper investigates the occurrence of ambiguous terms in two biomedical domains--research literature and clinical notes--and experiments with different feature sets for the word sense disambiguation (WSD) problem....
May 11 2009
Computerized physician order entry and medication errors: finding a balance
Bates D. Journal of Biomedical Informatics 38(4): 259-261, 2005. Type: Article
In 2005, the
Journal of the American Medical Association
published a paper [1] that caused considerable debate in the field of information technology (IT) for health care, mainly due to the fact that it was interpreted, by a num...
Jul 2 2007
Human-centered design of a distributed knowledge management system
Rinkus S., Walji M., Johnson-Throop K., Malin J., Turley J., Smith J., Zhang J. Journal of Biomedical Informatics 38(1): 4-17, 2005. Type: Article
Last year, at Cedars-Sinai Medical Center in Los Angeles, California, an expensive physician order entry system, which had been planned for years, was taken offline, after the medical staff rebelled. The physicians claimed that it mark...
Aug 10 2005
A systems engineering perspective on the human-centered design of health information systems
Samaras G., Horst R. Journal of Biomedical Informatics 38(1): 61-74, 2005. Type: Article
Samaras and Horst claim that the disciplines of systems engineering and ergonomics have much to offer to designers of health information systems. The US Food and Drug Administration (FDA) requires that a systems engineering method be u...
Jul 8 2005
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